Thursday, February 2, 2012
Astrobiology
Is there life elsewhere in the universe? And if there is,
are there any intelligent beings? How did life emerge
on the Earth, and, as a matter of fact, how do we define
life and intelligence? These are probably the most interesting
unsolved questions in science. During the last few
decades a whole new field of astrobiology has evolved
around these problems.
What is life?
There have been several science fiction tv-series showing
extraterrestrial life forms. Usually the sentient
beings have appeared quite humanlike, except of some
appendices or other rather trivial features that try to
make them unattractive. They may even have sex
with humans. However, if the foreign life forms have
evolved independently, interbreeding would be totally
impossible.
The chemistry of foreign beings could be totally different
from ours. Could we even understand that they
are living beings? In fact, what is life? It seems that
life is an elusive concept, difficult to define in terms of
just a few properties.We have only one example of life,
and therefore it is difficult to make general conclusions
of its properties. However, we can assume that certain
properties of the known life forms may be generalised
also to foreign life.
Common features of all terrestrial life forms are reproduction
and evolution. If living beings produced
exact replicas of themselves, there would be no evolution
and no adaptation to changing environments.
Thus the reproduction process must be slightly imperfect
leading to a variety of descendants. This will
give material for the natural selection, ‘survival of the
fittest’.
Natural selection is a fairly general principle, working
in some sense also outside of biology. Are there any
other general principles related to the evolution of life?
If we could find even one example of life that evolved
independently of ours, this would vastly improve our
knowledge.
Energy consumption is also characteristic of life. Life
requires increasing order, i.e. decreasing entropy. Local
decrease of entropy is not against thermodynamics: it
only means that a living being must be able to take
energy in some form and utilize it for reproduction,
growth, motion or other purposes.
To produce similar offsprings a living being must
have the ability to store information and pass it to
its descendants. All terrestrial life forms use DNA or
RNA molecules composed of nucleotides for storing
information (see next section).
Carbon can combine to form very complex
molecules. Silicon can also form large molecules but
they are not as stable as carbon compounds, and silicon
cannot form rings like carbon. Maybe some simple life
forms could be based on silicon, or on something quite
different that we have not even thought of.
Also a liquid solvent is needed. Our own life would
not be possible without water. It remains liquid in
a much wider temperature range than most other substances,
which makes it a good solvent. Yet in the
astronomical sense the temperature range is rather limited.
In a colder environment, methane or ammonium
might act as the solvent.
The basic building block of all terrestrial life forms
is the cell. It has a membrane surrounding liquid cytoplasm.
The cell membrane is semipermeable and
functions as a two-way filter that lets certain molecules
go in and others come out; this selective transport is
mediated via specific proteinaceous channels. There are
two kinds of cells, simpler prokaryotic cells and more
complex eukaryotic cells. In eukaryotic cells the genetic
material, in the form of DNA molecules, is inside
a nucleus, surrounded by a nuclear membrane. In the
prokaryotic cells there is no separate nucleus, and the
DNA floats coiled in the cytoplasm.
Terrestrial life is divided into three domains, Bacteria,
Archaea and Eukarya. Both Bacteria and Archaea
contain usually a single prokaryotic cell. Eukarya
contains all more complex beings, like animals and
plants.
Origin of life:
One way to try to understand the origin of the terrestrial
life is to start with the available atoms and
molecules and see if they could produce life. During
the last decades there has been considerable progress,
but the process is very complicated and not yet well understood.
Here we can only outline briefly how it might
have happened.
In a famous experiment in 1953 Harold Urey and
StanleyMiller sent energy in the form of electric sparks
through a gas mixture supposed to be similar to the
early atmosphere of the Earth, containing methane, ammonia,
hydrogen and water vapour. After a few days
the solution contained several organic compounds, including
some amino acids. At that time it was assumed
that the early atmosphere was reducing. More recent
studies suggest that this is not quite true, and the earliest
atmosphere was rather neutral, containing mostly
CO2, CO,N2, H2O and maybe some H2. Such an atmosphere
would have produced organic compounds much
slowlier, if at all.
Some amino acids have been found in meteorites.
Thus they seem to have been already present in the
nebula from which the planetary system condensed.
Complex organic molecules have been found also in
interstellar molecule clouds (Sect. 15.3). There have
even been claims of detecting the simplest amino acid,
glycine, but the results are controversial.
The next step, putting the basic blocks together to
form DNA or RNA molecules, is much more difficult.
This looks like the chicken and egg paradox: the information
contained in the DNA is needed to make
proteins, and proteins are needed to catalyse the production
of the nucleotides, which are the building blocks of
the nucleic acids. So which came first?
In the 1980’s Sidney Altman and Thomas Cech found
that some RNA molecules can act as catalysts. Since
RNA resembles DNA, it can store genetic material to
some extent. Thus there is no need for the DNA and
proteins. Even RNA fragments cannot be synthesized
easily, but as they act as enzymes and can replicate, it
is assumed that the initial chemical evolution first led to
short and relatively simple RNA molecules. Eventually
some of then combined to more complex ones, some
of which were better adapted to the environment either
by replicating faster or by being more durable. Thus
the natural selection started to produce more complex
molecules; this chemical evolutionwasworking already
before actual life emerged.
The first cell-like structures could evolve from asymmetric
molecules or lipids, one end of which attracts
water and the other end repels water. In water such
molecules tend to form bi-layered membranes where
the hydrophilic or water-attracting end points outwards
and hydrophobic or water-repelling end inwards. Further
on, such membranes form spontaneously spherical
vesicles. If RNA happened to get inside such a membrane,
it may have been protected from the environment,
and could have been contained within its own chemical
environment. In some cases this could have improved
its replication, and thus led to further increase its
concentration within the vesicle.
It is currently assumed that the first primitive life
forms were RNA life. RNA has, however, some drawbacks.
It is not as stable as DNA, and its replication is
not as accurate as the protein mediated replication of
DNA. Evolution of RNA led finally to the appearance
of DNA molecules. Since DNA is superior to RNA due
to its stability, it soon took over the role of information
carrier.
Currently the energy of sunlight is utilized by plants
and some bacteria in photosynthesis, which produces
carbohydrates from water and carbon dioxide. There
are also organisms that do not need sunlight but can
use chemical energy to produce organic matter in a process
called chemosynthesis. Such organisms have been
found e.g. near hydrothermal vents on mid-ocean ridges
(Fig. 20.2). These vents eject hot mineral-rich water to
the ocean. Even though the temperature can be as high as
400 ◦C, the high pressure prevents the water from boiling.
Although this is too hot for life, there are regions
around the vents where the temperature is suitable for
such thermophiles. They could have been the first life
forms, in which case life did not emerge in a Darwinian
warm pond but in a hot pressure kettle.
This kind of bottom-up approach tries to build
life from the simple constituents already available in
the interstellar space. Another approach, the top-down
method, tries to trace life back in time as far as possible.
The oldest sediment rocks on the Earth, found in
Isua in western Greenland, are 3.8 Ga old. Since they
contain sediments, deposited by water, and pillow lavas,
formed in water, the temperature at that time could not
have a value very different from the current one. The
solar luminosity was then lower than nowadays, but
the difference was compensated by a higher amount of
decaying radioactive materials and remanent heat of the
recently born Earth.
Oldest signs of life are almost as old. These signs
are, however, just isotope ratios that can be inter-
preted as results of bacterial life. The carbon isotope
12C is about 100 times as abundant as the heavier
isotope 13C. The lighter isotope is somewhat more reactive
and tends to be enriched in living organisms.
In the Isua rocks there are sediments with a small
excess of 12C, which might indicate some kind of
life.
In the Warrawoona Group in Australia there are
3.5 Ga old formations that look like stromatolites,
mounds consisting of layers of microbial cells and calcium
carbonate. If they are real stromatolites, they may
have been formed by cyanobacteria, but this is still
a matter of debate.
In the early times, at least for a billion years,
photosynthesis was non-oxygenic. Cyanobacteria were
possibly the first organisms capable of oxygenic photosynthesis.
They started to produce oxygen, but initially
it was dissolved in water and consumed in different
oxidation reactions. Eventually also the amount of atmospheric
oxygen started to rise, and 2.2 Ga ago it reached 10% of the current value, i.e. about 2% of the
total abundance in the atmosphere.
First eukaryotes appeared in the fossil record 2.1Ga
ago and multicellular organisms 1.5 Ga ago. The fossil
evidence becomes much clearer towards the end of the
Proterozoic era. The Ediacara fauna, which is about 600
million years old, contains the oldest fossils of big and
complex animals. These were softbodied animals. At
the end of the Cambrian period 543 million years ago
traces of the Ediacara fauna disappear and are replaced
by a huge variety of new animals, many with protecting
shields. This increase in the variety of life forms is called
the Cambrian explosion.
All life forms use similar genetic codes, which indicates
that they have the same origin. This forefather
of all life is called LUCA, the Last Universal Common
Ancestor.
Relationships of living beings can be studied by comparing
their DNA or RNA. The more the molecules of
two species differ, the more distant the species are in
the evolutionary sense. These distances can be plotted
as a map, called the phylogenetic tree.
The phylogenetic tree, as we now know it, has
three branches, the domains of Archaea, Bacteria and
Eukarya. The organisms closest to the root are thermophiles
that live close to hydrothermal vents or in hot
water. Obviously, the LUCA lived in such a hot environment.
However,RNAmolecules do not remain intact
in such hot environments. If the earliest life was RNA
life, it would have evolved in a cooler environment.
Currently we do not know the real birthplace of life.
Although the phylogenetic tree points to a common
origin, there may have been other starts, too, but natural
selection has eliminated the other ones that were less
competitive.
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